Home Page | CV | Publications | Research | Courses | Tetrahymena Links | Cell Biology Links | Microscopy Links
Chromatin
  • Bianchi, M. E. & Agresti, A. 2005. HMG proteins: dynamic players in gene regulation and differentiation. Curr. Opin. Genet. Dev. 15: 496-506.
  • Catez, F., Ueda, T. & Bustin, M. 2006. Determinants of histone H! mobility and chromatin binding in living cells. Nat. Struct. Mol. Biol. 13: 305-310.
  • Eberharter, A., Ferreira R. & Becker, P. B. 2005. Dynamic chromatin: concerted nucleosome remodelling and acetylation. Biol. Chem. 386: 745-751.
  • Ferreira, H. & Owen-Hughes, T. 2006. Lighting up nucleosome spacing. Nat. Struct. Mol. Biol. 13: 1047-1049.
  • Fuchs, J., Demidov, D., Houben, A. & Schubert, I. 2006. Chromosomal histone modification patterns — from conservation to diversity. Trends Plant Sci. 11: 199-208.
  • Fuks, F. 2005. DNA methylation and histone modification: teaming up to silence genes. Curr. Opin. Genet. Dev. 15: 490-495.
  • Haince, J.-F., Rouleau, M. & Poirer, G. G. 2006. Gene expression needs a break to unwind before carrying on. Science 312: 1752-1753.
  • Huebert, D. J. & Bernstein, B. E. 2005. Genomic views of chromatin. Curr. Opin. Genet. Dev. 15: 476-481.
  • Jim, J., Cai, Y., Li, B., Conaway, R. C., Workman, J. L., Conaway, J. W. & Kusch, T. 2005. In and out: histone variant exchange in chromatin. Trends Biochem. Sci. 30: 680-687.
  • Kamakaka, R. T. & Biggins, S. 2005. Histone variants: deviants? Genes Dev. 19: 295-310.
  • Kimura, A., Matsubara, K & Hoirkoshi, M. 2005. A decade of histone acetylation: Marking eukaryotic chromosomes with specific codes. J. Biochem. 138: 647-662.
  • Kiss, T. 2005. Biogenesis of small nuclear RNPs. J. Cell Sci. 117: 5949-5951.
  • Kouzarides, T. 2007. Chromatin modifications and their functions. Cell 128: 693-705.
  • Li, B., Carey, M. & Workman, J. L. 2007. The role of chromatin during transcription. Cell: 707-719.
  • Lieb, J. D. & Clarke, N. D. 2005. Control of transcription through intragenic patterns of nucleosome composition. Cell 123: 1187-1190.
  • Luger, K. 2006. Dynamic nucleosomes. Chromosome Res. 14: 5-16.
  • Marx, J. 2005. Nucleosomes help guide yeast gene activity. Science 308: 1724.
  • McBryant, S. J., Adams, V. H. & Hansen, J. C. 2006. Chromatin architectural proteins. Chromosome Res. 14: 39-51.
  • Mellor, J. 2006. Dynamic nucleosomes and gene transcription. Trends Genet. 22: 320-329.
  • Mersfelder, E. L. & Parthun, M. R. 2006. The tale beyond the tail: histone core domain modifications and the regulation of chromatin structure. Nucl. Acids Res. 34: 2653-2662.
  • Misteli, T. 2007. Beyond the sequence: Cellular organization of genome function. Cell 128: 787-800.
  • Morris, C. A. & Moazed, D. 2007. Centromere assembly and propagation. Cell 128: 647-650.
  • Polo, S. E. & Almouzni, G. 2006. Chromatin assembly: a basic recipe with various flavours. Curr. Opin. Genet. Dev. 16: 104-111.
  • Pusarla, R.-H. & Bhargava, P. 2005. Histones in functional diversification. Core histone variants. FEBS J. 272: 5149-5168.
  • Shaklai, S., Amariglio, N., Rechavi, G. & Simon, A. J. 2007. Gene silencing at the nuclear periphery. FEBS J. 274: 1383-1392.
  • Tremethick, D. J. 2007. Higher-order structures of chromatin: The elusive 30 nm fiber. Cell 128: 651-654.
  • Turner, B. M. 2007. Defining an epigenetic code. Nat. Cell Biol. 9: 2-6.
  • Wei, G. H., Liu, D. P. & Liang, C. C. 2005. Chromatin domain boundaries: insulators and beyond. Cell Res. 15: 292-300.
  • Wassenegger, M. 2005. The role of the RNAi machinery in heterochromatin formation. Cell 122: 13-16.
  • Woodcock, C. L. 2006. Chromatin architecture. Curr. Opin. Struct. Biol. 16: 213-220.
Nuclear Architecture and Function
  • Aguilera, A. 2005. Cotranscriptional mRNP assembly: from the DNA to the nuclear pore. Curr. Opin. Cell Biol. 17: 242-250.
  • Branco, M. R. & Pombo, A. 2007. Chromosome organization: new facts, new models. Trends Cell Biol. 17: 127-134.
  • Ching, R. W., Dellaire, G., Eskiw, C. H. & Bazett-Jones, D. P. 2005. PML bodies: a meeting place for genomic loci? J. Cell Sci. 118: 847-854.
  • Cole, C. N. & Scarcelli, J. J. 2006. Transport of messenger RNA from the nucleus to the cytoplasm. Curr. Opin. Cell Biol. 18: 299-306.
  • Cremer, T., Cremer, M., Dietzel, S., Müller, S., Solovei, I. & Fakan, S. 2006. Chromosome territories — a functional nuclear landscape. Curr. Opin. Cell Biol. 18: 307-316.
  • Espada, J. & Esteller, M. 2007. Epigenetic control of nuclear architecture. Cell. Mol. Life Sci. 64: 449-457.
  • Fraser, P. & Bickmore, W. 2007. Nuclear organization of teh genome and the potential for gene regulation. Nature 447: 413-417.
  • Gorski, S. & Misteli, T. 2005. Systems biology in the cell nucleus. J. Cell Sci. 118: 4083-4092.
  • Gorski, S. A., Dundr, M. & Misteli, T. 2006. The road much traveled: trafficking in the cell ncucleus. Curr. Opin. Cell Biol. 18: 284-290.
  • Handwerger, K. E. I Gall, J. G. 2006. Subnuclear organelles: new insights into form and function. Trends Cell Biol. 16: 19-26.
  • Matera, A. G. 2006. Drosophila Cajal bodies: accessories not included. J. Cell Biol. 172: 791-793.
  • Matera, A. G. & Shpargel, K. B. 2006. Pumping RNA: nuclear bodybuilding along the RNP pipeline. Curr. Opin. Cell Biol. 18: 317-324.
  • Misteli, T. 2005. Concepts in nuclear architecture. BioEssays 27: 477-487.
  • Pandita, T. K., Hunt, C. R., Sharma, G. G. & Yang, Q. 2007. Regulation of telomere movement by telomere chrimatin structure. Cell. Mol. Life Sci. 64: 131-138.
  • Pederson, T. & Aebi, U. 2005. Nuclear actin extends, with no contraction in sight. Mol. Biol. Cell. 16: 5055-5060.
  • Pikaard, C. & Pontes, O. 2007. Heterochromatin: condense or excise. Nat. Cell Biol. 9: 19-20.
  • Rizk, R. S. & Walczak, C. E. 2005. Chromosome dynamics: Actin's gone fishing. Curr. Biol. 15: R841-R842.
  • Stanĕk, D. & Neugebauer, K. M. 2006. The Cajal body: a meeting place for spliceosomal snRNPs in the nuclear maze. Chromosoma 115: 343-354.
RNA Export
  • Cole, C. N. & Scarcelli, J. J. 2006. Unravelling mRNA export. Nat. Cell Biol. 8: 645-647.
  • Darzacq, X., Singer, R. H. & Shav-Tal, Y. 2005. Dynamics of transcription and mRNA export. Curr. Opin. Cell Biol. 17: 332-339.
  • Kutay, U. & Güttinger. 2005. Leucine-rich nuclear-export signals: born to be weak. Trends Cell Biol. 15: 121-124.
  • Moore, M. J. 2005. From birth to death: The complex lives of eukaryotic mRNAs. Science 309: 1514-1518.
  • Saguez, C., Olesen, J. R. & xJensen, J. R. 2005. Formation of export-competent mRNP: excaping nuclear destruction. Curr. Opin. Cell Biol. 17: 287-293.
  • Sommer, P. & Nehrbass, U. 2005. Quality control of messenger ribonucleoprotein particles in the nucleus and at the pore. Curr. Opin. Cell Biol. 17: 294-301.
Updated June 17, 2007